hamzameer/ncbi-mcp-server
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The NCBI MCP Server is a Model Context Protocol server that provides access to NCBI E-utilities and BLAST tools, enabling AI applications to intelligently search, fetch, and analyze biological data from NCBI databases.
Tools
Functions exposed to the LLM to take actions
search_ncbi
Search any NCBI database with natural language queries
fetch_records
Retrieve full records in various formats (XML, FASTA, GenBank, etc.)
summarize_records
Get structured summaries with titles, authors, journals, etc.
find_related_records
Discover related records across different databases
blast_search
Perform BLAST sequence alignment searches
list_databases
Get all available NCBI databases
get_database_info
Get detailed information about specific databases
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client