pickleton89/cbioportal-mcp
If you are the rightful owner of cbioportal-mcp and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.
The cBioPortal MCP Server is a high-performance, production-ready Model Context Protocol (MCP) server designed to facilitate seamless interaction between AI assistants and cancer genomics data from cBioPortal.
Tools
Functions exposed to the LLM to take actions
get_cancer_studies
List all available cancer studies with pagination and filtering.
search_studies
Search studies by keyword with full-text search and sorting.
get_study_details
Retrieve detailed study information with comprehensive metadata.
get_samples_in_study
Fetch samples for specific studies with paginated results.
get_genes
Retrieve gene information by ID or symbol with flexible identifiers.
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client