nuin/agr-mcp-server

3.1

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The Alliance of Genome Resources MCP Server provides programmatic access to genomic data, bioinformatics tools, and comparative genomics research capabilities.

Tools

Functions exposed to the LLM to take actions

Gene Search

Search for genes across multiple model organisms.

Orthology Analysis

Perform cross-species orthology analysis.

Disease Associations

Study gene-disease associations.

Expression Analysis

Analyze gene expression data.

BLAST Sequence Analysis

Perform BLAST searches for sequence analysis.

Prompts

Interactive templates invoked by user choice

No prompts

Resources

Contextual data attached and managed by the client

No resources

Author

nuin

Claim Ownership

Verify you have write access to the repository

Repository

https://github.com/nuin/agr-mcp-server

Last publish date

2025-06-23

Last update date

2025-06-23

Server configs

in claude code

{
  "mcpServers": {
    "agr-genomics-enhanced": {
      "command": "python3",
      "args": ["/Users/nuin/Projects/alliance/agr-mcp-server/src/agr_server_enhanced.py"],
      "cwd": "/Users/nuin/Projects/alliance/agr-mcp-server",
      "env": {
        "VIRTUAL_ENV": "/Users/nuin/Projects/alliance/agr-mcp-server/venv"
      }
    }
  }
}

in claude desktop

{
  "mcpServers": {
    "agr-genomics-enhanced": {
      "command": "python3",
      "args": ["/Users/nuin/Projects/alliance/agr-mcp-server/src/agr_server_enhanced.py"],
      "cwd": "/Users/nuin/Projects/alliance/agr-mcp-server",
      "env": {
        "VIRTUAL_ENV": "/Users/nuin/Projects/alliance/agr-mcp-server/venv"
      }
    }
  }
}