MCPmed/PLSDBmcp
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The PLSDB MCP Server is a Model Context Protocol server designed to interact with the PLSDB API, providing tools to search, filter, and retrieve plasmid data.
Tools
Functions exposed to the LLM to take actions
get_plasmid_summary
Get plasmid summary information for a given NUCCORE_ACC.
start_fasta_download
Start preparing FASTA download for multiple plasmid accessions.
get_fasta_download
Get results from FASTA download job.
start_sequence_search
Start sequence search in PLSDB using various search methods.
get_sequence_search_results
Get results from sequence search job.
filter_plasmids_by_nuccore
Filter PLSDB plasmids based on nuccore attributes.
filter_plasmids_by_biosample
Filter PLSDB plasmids based on biosample attributes.
filter_plasmids_by_taxonomy
Filter PLSDB plasmids based on taxonomy attributes.
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client