biothings-mcp
If you are the rightful owner of biothings-mcp and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.
MCP (Model Context Protocol) server for Biothings.io
The biothings-mcp server implements the Model Context Protocol (MCP) for BioThings, providing a standardized interface for accessing and manipulating biomedical data. MCP enables AI assistants and agents to access specialized biomedical knowledge through structured interfaces to authoritative data sources. Supported BioThings data sources include mygene.info, myvariant.info, and mychem.info. The server offers structured access, natural language queries, type safety, and AI integration, making it a powerful tool for interacting with biomedical databases. It provides dedicated API interfaces for different BioThings data types using the biothings-typed-client library, with mixins for gene, variant, chemical, and taxon interfaces. The server can be run in various modes, including STDIO, HTTP, and SSE, to accommodate different client requirements.
Features
- Structured Access: Direct connection to authoritative biomedical data sources.
- Natural Language Queries: Simplified interaction with specialized databases.
- Type Safety: Strong typing and validation through biothings-typed-client.
- AI Integration: Seamless integration with AI assistants and agents.
- Multiple Modes: Supports STDIO, HTTP, and SSE modes for flexible client communication.
