gwas-catalog-mcp
If you are the rightful owner of gwas-catalog-mcp and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.
The GWAS Catalog MCP Server provides a programmatic interface to access GWAS study, variant, trait, and association data through the GWAS Catalog REST API.
The GWAS Catalog MCP Server is designed to facilitate access to the GWAS Catalog REST API, providing users with a streamlined method to retrieve data related to genome-wide association studies. The server is capable of handling large datasets by offering both in-memory and file-based storage solutions. It is currently under active development, meaning that features and APIs may change without prior notice. The server is built using dependencies such as 'uv', 'mcp[cli]', 'fastmcp', and 'requests'. The directory structure includes main server entry points, utility functions, project metadata, and a test suite. Users can install dependencies, activate a virtual environment, and run the server or tests using provided scripts. The server supports various endpoints for retrieving study, association, variant, and trait data, with options to filter and format the output according to user needs.
Features
- Programmatic access to GWAS Catalog data
- Handles large datasets with in-memory and file-based options
- Supports multiple endpoints for study, variant, trait, and association data
- Customizable output with common parameters
- Active development with potential for new features
Tools
GWAS_catalog
Tool for accessing GWAS Catalog data with various endpoints and parameters.
