hyennnnnnn/scvi-mcp
3.2
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An MCP server for deep probabilistic analysis of single-cell omics data using scvi-tools with natural language.
Tools
Functions exposed to the LLM to take actions
scvi_setup_anndata
Prepare AnnData object for SCVI analysis.
scvi_create_model
Create a new SCVI model.
scvi_train_model
Train the SCVI model on the dataset.
scvi_get_latent_representation
Extract latent representation from the model.
scvi_differential_expression
Perform differential expression analysis.
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client