bio-mcp/bio-mcp-seqkit
3.2
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MCP (Model Context Protocol) server for SeqKit, a cross-platform and ultrafast toolkit for FASTA/Q file manipulation.
Tools
Functions exposed to the LLM to take actions
seqkit_stats
Get basic statistics of FASTA/FASTQ files.
seqkit_subseq
Extract subsequences by region or BED file.
seqkit_grep
Search sequences by pattern or ID.
seqkit_seq
Transform sequences and filter by length.
seqkit_sort
Sort sequences by different criteria.
seqkit_rmdup
Remove duplicate sequences.
seqkit_sample
Sample sequences randomly by number or proportion.
seqkit_convert
Convert between FASTA and FASTQ formats.
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client