bio-mcp-fastqc

bio-mcp/bio-mcp-fastqc

3.2

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The Bio-MCP FastQC Server is a Model Context Protocol (MCP) server designed to facilitate quality control analysis of sequencing data using FastQC and MultiQC tools.

Tools

Functions exposed to the LLM to take actions

fastqc_single

Run FastQC on a single FASTQ/FASTA file.

fastqc_batch

Run FastQC on multiple files in a directory.

multiqc_report

Generate MultiQC report from FastQC results.

fastqc_single_async

Queue single file analysis for large datasets.

fastqc_batch_async

Queue batch analysis for large datasets.

Prompts

Interactive templates invoked by user choice

No prompts

Resources

Contextual data attached and managed by the client

No resources