bio-mcp-bwa

bio-mcp/bio-mcp-bwa

3.2

If you are the rightful owner of bio-mcp-bwa and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.

MCP server for BWA sequence alignment tool, providing AI assistants with access to BWA functionalities for genome alignment.

Tools

Functions exposed to the LLM to take actions

bwa_index

Create a BWA index for a reference genome.

bwa_mem

Align reads using the BWA-MEM algorithm.

bwa_aln

Find SA coordinates with the BWA-backtrack algorithm.

bwa_samse

Generate single-end alignments in SAM format.

bwa_sampe

Generate paired-end alignments in SAM format.

Prompts

Interactive templates invoked by user choice

No prompts

Resources

Contextual data attached and managed by the client

No resources