Babajan-B/BioQC-MCP
3.3
If you are the rightful owner of BioQC-MCP and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to dayong@mcphub.com.
A professional Model Context Protocol (MCP) server for comprehensive bioinformatics quality control analysis.
Tools
Functions exposed to the LLM to take actions
run_fastqc
Execute FastQC analysis on FASTQ files
run_multiqc
Generate MultiQC aggregate reports
list_fastq_files
Auto-detect FASTQ files in directories
parse_fastqc_summary
Extract quality metrics
extract_fastqc_plots
Retrieve plot data
read_html_file
Read FastQC/MultiQC HTML reports
analyze_html_content
Parse HTML structure and data
generate_chart
Create custom visualizations (20+ chart types)
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client