PubChem-MCP-Server

Augmented-Nature/PubChem-MCP-Server

3.4

If you are the rightful owner of PubChem-MCP-Server and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.

The Unofficial PubChem MCP Server is a comprehensive Model Context Protocol server designed to provide access to the extensive PubChem chemical database, offering tools for chemical search, structure analysis, property assessment, bioassay data retrieval, and safety information.

Tools

Functions exposed to the LLM to take actions

search_compounds

Search by name, CAS number, formula, or identifier.

get_compound_info

Detailed compound information by CID.

search_similar_compounds

Tanimoto similarity search.

get_compound_properties

Molecular weight, logP, TPSA, etc.

get_safety_data

GHS hazard classifications.

Prompts

Interactive templates invoked by user choice

No prompts

Resources

Contextual data attached and managed by the client

No resources