PDB-MCP-Server

PDB-MCP-Server

3.4

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The PDB MCP Server is a Model Context Protocol server that provides access to the Protein Data Bank, offering tools and resources for exploring 3D structures of proteins, nucleic acids, and complex assemblies.

search_structures

Search PDB database for protein structures by keyword, protein name, or PDB ID.

get_structure_info

Get detailed information for a specific PDB structure.

download_structure

Download structure coordinates in various formats (PDB, mmCIF, mmTF, XML).

search_by_uniprot

Find PDB structures associated with a UniProt accession.

get_structure_quality

Get structure quality metrics and validation data.