GeneOntology-MCP-Server
If you are the rightful owner of GeneOntology-MCP-Server and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.
The Unofficial Gene Ontology MCP Server is a comprehensive server designed to facilitate access to Gene Ontology data, enabling AI systems to perform ontology-based analysis, gene annotation research, and functional enrichment studies.
The Unofficial Gene Ontology MCP Server is a robust Model Context Protocol server that provides seamless access to Gene Ontology (GO) data. It is designed to support AI systems in conducting ontology-based analyses, gene annotation research, and functional enrichment studies. The server offers a range of features, including term search and lookup, ontology navigation, and gene annotations. It also provides validation of GO identifiers and comprehensive ontology statistics. The server integrates with primary data sources such as the QuickGO API and the GO Consortium, ensuring up-to-date and accurate information. With its comprehensive error handling, the server addresses issues such as invalid GO identifiers, missing terms, API timeouts, network errors, and malformed requests. This makes it a reliable tool for researchers and developers working with gene ontology data.
Features
- Term Search & Lookup: Search GO terms by keyword, name, or definition.
- Ontology Navigation: Explore hierarchical relationships between terms.
- Gene Annotations: Access GO annotations for genes and proteins.
- Validation: Validate GO identifiers and check term existence.
- Statistics: Get comprehensive ontology statistics and metadata.
Tools
search_go_terms
Search across Gene Ontology terms by keyword, name, or definition.
get_go_term
Get detailed information for a specific GO term.
validate_go_id
Validate GO identifier format and check if term exists.
get_ontology_stats
Get statistics about GO ontologies (term counts, recent updates).