Ensembl-MCP-Server

Augmented-Nature/Ensembl-MCP-Server

3.2

If you are the rightful owner of Ensembl-MCP-Server and would like to certify it and/or have it hosted online, please leave a comment on the right or send an email to henry@mcphub.com.

The Unofficial Ensembl MCP Server provides a comprehensive interface to access Ensembl's genomic data through a standardized Model Context Protocol (MCP).

Tools

Functions exposed to the LLM to take actions

lookup_gene

Get detailed gene information by stable ID or symbol.

get_transcripts

Retrieve all transcripts for a gene with detailed structure.

get_sequence

Get DNA sequence for genomic coordinates or gene/transcript ID.

get_variants

Get genetic variants in a genomic region.

get_regulatory_features

Get regulatory elements in genomic region.

Prompts

Interactive templates invoked by user choice

No prompts

Resources

Contextual data attached and managed by the client

No resources