Augmented-Nature/BioThings-MCP-Server
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The Unofficial BioThings.io MCP Server provides access to the BioThings.io ecosystem of APIs, including MyGene.info and MyVariant.info, enabling seamless integration of comprehensive gene and variant annotation data into workflows.
Tools
Functions exposed to the LLM to take actions
get_gene_annotation
Retrieve detailed gene annotation by Entrez or Ensembl ID.
query_genes
Search genes using flexible syntax (symbols, names, genomic intervals, etc.).
get_variant_annotation
Retrieve variant annotation by HGVS ID.
query_variants
Search variants using genomic ranges, rsIDs, gene names, and filters.
Prompts
Interactive templates invoked by user choice
No prompts
Resources
Contextual data attached and managed by the client